Staff View: Gene prediction system

Gene prediction system

With the increasingly popularity of genome sequencing, transforming such raw sequence data into knowledge remains a hard task. This project will develop an application for gene prediction using development tools such as Perl and PHP. The project will identify stretches of sequence for genomic DNA th...

Full description

Saved in:

Bibliographic Details
Main Authors:	S.R.M., Shukri, H.Y., Hamdani
Format:	Conference or Workshop Item
Published:	2008
Subjects:	Q Science (General) QA75 Electronic computers. Computer science
Online Access:	http://eprints.utp.edu.my/123/1/paper.pdf http://www.scopus.com/inward/record.url?eid=2-s2.0-57349157231&partnerID=40&md5=e8e8acc185e866e272cdb72c7328318e http://eprints.utp.edu.my/123/
Tags:	Add Tag No Tags, Be the first to tag this record!

id	my.utp.eprints.123
record_format	eprints
spelling	my.utp.eprints.1232017-01-19T08:26:43Z Gene prediction system S.R.M., Shukri H.Y., Hamdani Q Science (General) QA75 Electronic computers. Computer science With the increasingly popularity of genome sequencing, transforming such raw sequence data into knowledge remains a hard task. This project will develop an application for gene prediction using development tools such as Perl and PHP. The project will identify stretches of sequence for genomic DNA that is biologically functional including protein coding regions. The 3 steps that involve are transcription, splicing and translation. Transcription is the process of copying DNA to RNA. Meanwhile, splicing is a modification of genetic information after a few transcriptions. The process determines introns (useless information) and exons (useful information) in DNA sequence. Hidden Markov Model which is a mathematical functional will be used in this step to predict the DNA sequence. The introns will be removed while the exons will be combined together to produce the mRNA. The final step is the translation which is the process by which mRNA is translated into proteins. The protein sequence is the final output of Gene Prediction System. More knowledge on gene prediction will be explored in order to get better understanding of how gene prediction works. Â© 2008 IEEE. 2008 Conference or Workshop Item NonPeerReviewed application/pdf http://eprints.utp.edu.my/123/1/paper.pdf http://www.scopus.com/inward/record.url?eid=2-s2.0-57349157231&partnerID=40&md5=e8e8acc185e866e272cdb72c7328318e S.R.M., Shukri and H.Y., Hamdani (2008) Gene prediction system. In: International Symposium on Information Technology 2008, ITSim, 26 August 2008 through 29 August 2008, Kuala Lumpur. http://eprints.utp.edu.my/123/
institution	Universiti Teknologi Petronas
building	UTP Resource Centre
collection	Institutional Repository
continent	Asia
country	Malaysia
content_provider	Universiti Teknologi Petronas
content_source	UTP Institutional Repository
url_provider	http://eprints.utp.edu.my/
topic	Q Science (General) QA75 Electronic computers. Computer science
spellingShingle	Q Science (General) QA75 Electronic computers. Computer science S.R.M., Shukri H.Y., Hamdani Gene prediction system
description	With the increasingly popularity of genome sequencing, transforming such raw sequence data into knowledge remains a hard task. This project will develop an application for gene prediction using development tools such as Perl and PHP. The project will identify stretches of sequence for genomic DNA that is biologically functional including protein coding regions. The 3 steps that involve are transcription, splicing and translation. Transcription is the process of copying DNA to RNA. Meanwhile, splicing is a modification of genetic information after a few transcriptions. The process determines introns (useless information) and exons (useful information) in DNA sequence. Hidden Markov Model which is a mathematical functional will be used in this step to predict the DNA sequence. The introns will be removed while the exons will be combined together to produce the mRNA. The final step is the translation which is the process by which mRNA is translated into proteins. The protein sequence is the final output of Gene Prediction System. More knowledge on gene prediction will be explored in order to get better understanding of how gene prediction works. Â© 2008 IEEE.
format	Conference or Workshop Item
author	S.R.M., Shukri H.Y., Hamdani
author_facet	S.R.M., Shukri H.Y., Hamdani
author_sort	S.R.M., Shukri
title	Gene prediction system
title_short	Gene prediction system
title_full	Gene prediction system
title_fullStr	Gene prediction system
title_full_unstemmed	Gene prediction system
title_sort	gene prediction system
publishDate	2008
url	http://eprints.utp.edu.my/123/1/paper.pdf http://www.scopus.com/inward/record.url?eid=2-s2.0-57349157231&partnerID=40&md5=e8e8acc185e866e272cdb72c7328318e http://eprints.utp.edu.my/123/
_version_	1738655029254946816
score	13.211869

Gene prediction system

Similar Items