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Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia

Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of Ischy...

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Main Authors: Miga, Marylin, Jahari, Puteri Nur Syahzanani, Parimannan, Sivachandran, Rajandas, Heera, Abdul-Latiff, Muhammad Abu Bakar, Yap, Jing Wei, Shamsir, Mohd. Shahir, Mohd. Salleh, Faezah
Format: Article
Language:English
Published: Elsevier Inc. 2023
Subjects:
Q Science (General)
Online Access:http://eprints.utm.my/106496/1/FaezahMohdSalleh2023_CharacterizationOfTheCompleteMitogenomeDataOfIschyjaMarapok.pdf
http://eprints.utm.my/106496/
http://dx.doi.org/10.1016/j.dib.2023.109253
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spelling my.utm.1064962024-07-09T06:15:48Z http://eprints.utm.my/106496/ Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Abdul-Latiff, Muhammad Abu Bakar Yap, Jing Wei Shamsir, Mohd. Shahir Mohd. Salleh, Faezah Q Science (General) Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of Ischyja marapok from Malaysia was completely sequenced using the next-generation sequencing technology, Illumina NovaSeq 6000 and analyzed. The mitogenome has a sequence length of 15,421 bp, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs) and a control region. The mitogenome is A + T biased (80.6%), with the base composition of A (39.2%), T (41.4%), C (11.9%) and G (7.5%). Among the 13 PCGs, 12 were initiated by the standard ATN codon, except for COX1 which utilizes the CGA start codon. Two PCGs were terminated with an incomplete stop codon T, while others ended with a TAA codon. Phylogenetic tree analyses showed that the sequenced I. marapok resides within the Erebinae subfamily and is closely related to Ischyja manlia (MW664367) with high bootstrap support and posterior probabilities. This dataset presented the mitogenome data of I. marapok from Malaysia, which is valuable for further research of their phylogeny and the diversification of the Ischyja genus. Also, this dataset can be implemented and used as references to assess environmental changes in the terrestrial ecosystem via environmental DNA approaches. The mitogenome of I. marapok is available in GenBank under the accession number ON165249. Elsevier Inc. 2023 Article PeerReviewed application/pdf en http://eprints.utm.my/106496/1/FaezahMohdSalleh2023_CharacterizationOfTheCompleteMitogenomeDataOfIschyjaMarapok.pdf Miga, Marylin and Jahari, Puteri Nur Syahzanani and Parimannan, Sivachandran and Rajandas, Heera and Abdul-Latiff, Muhammad Abu Bakar and Yap, Jing Wei and Shamsir, Mohd. Shahir and Mohd. Salleh, Faezah (2023) Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia. Data in BriefVolume, 48 (NA). pp. 1-11. ISSN 2352-3409 http://dx.doi.org/10.1016/j.dib.2023.109253 DOI : 10.1016/j.dib.2023.109253
institution Universiti Teknologi Malaysia
building UTM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Malaysia
content_source UTM Institutional Repository
url_provider http://eprints.utm.my/
language English
topic Q Science (General)
spellingShingle Q Science (General)
Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latiff, Muhammad Abu Bakar
Yap, Jing Wei
Shamsir, Mohd. Shahir
Mohd. Salleh, Faezah
Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
description Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of Ischyja marapok from Malaysia was completely sequenced using the next-generation sequencing technology, Illumina NovaSeq 6000 and analyzed. The mitogenome has a sequence length of 15,421 bp, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs) and a control region. The mitogenome is A + T biased (80.6%), with the base composition of A (39.2%), T (41.4%), C (11.9%) and G (7.5%). Among the 13 PCGs, 12 were initiated by the standard ATN codon, except for COX1 which utilizes the CGA start codon. Two PCGs were terminated with an incomplete stop codon T, while others ended with a TAA codon. Phylogenetic tree analyses showed that the sequenced I. marapok resides within the Erebinae subfamily and is closely related to Ischyja manlia (MW664367) with high bootstrap support and posterior probabilities. This dataset presented the mitogenome data of I. marapok from Malaysia, which is valuable for further research of their phylogeny and the diversification of the Ischyja genus. Also, this dataset can be implemented and used as references to assess environmental changes in the terrestrial ecosystem via environmental DNA approaches. The mitogenome of I. marapok is available in GenBank under the accession number ON165249.
format Article
author Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latiff, Muhammad Abu Bakar
Yap, Jing Wei
Shamsir, Mohd. Shahir
Mohd. Salleh, Faezah
author_facet Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latiff, Muhammad Abu Bakar
Yap, Jing Wei
Shamsir, Mohd. Shahir
Mohd. Salleh, Faezah
author_sort Miga, Marylin
title Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_short Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_full Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_fullStr Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_full_unstemmed Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_sort characterization of the complete mitogenome data of ischyja marapok (lepidoptera: noctuoidea: erebidae) from malaysia
publisher Elsevier Inc.
publishDate 2023
url http://eprints.utm.my/106496/1/FaezahMohdSalleh2023_CharacterizationOfTheCompleteMitogenomeDataOfIschyjaMarapok.pdf
http://eprints.utm.my/106496/
http://dx.doi.org/10.1016/j.dib.2023.109253
_version_ 1805880819769671680
score 13.211869

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