Staff View: Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies

Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies

Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variabil...

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Main Authors:	Haris, Hidayah, Nur Hartini Sariyati, Nur Hartini Sariyati, Ramli, Farah Farhana, Abdullah-Fauzi, Nurfatiha Akmal Fawwazah, Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani, Md-Zain, Badrul Munir, Mohd-Ridwan, Abd Rahman, Aifat, Nor Rahman, Ibnu Maryanto, Ibnu Maryanto, Abdul-Latiff, Muhammad Abu Bakar
Format:	Conference or Workshop Item
Language:	English
Published:	2023
Subjects:	QH540-549.5 Ecology
Online Access:	http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf http://eprints.uthm.edu.my/11698/ https://doi.org/10.1051/bioconf/20249401005
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spelling	my.uthm.eprints.116982024-11-17T07:23:07Z http://eprints.uthm.edu.my/11698/ Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar QH540-549.5 Ecology Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variability, impeding the comparability of findings. This study addresses this issue by examining methodological variations in gut microbiome research on wildlife and domesticated animals in Southeast Asia. A comprehensive search of 91 relevant studies on the SCOPUS database yielded 54 suitable publications for review, encompassing diverse taxa such as invertebrates (20), fishes (7), reptiles (3), birds (5), and mammals (19). Notably, various methodological approaches were employed to characterize microbial communities, including the source of isolation, various culture-based approaches, sequencing methods, and the targeted markers. Based on the information provided in this study, future studies should strive to develop guidelines and best practices specific to gut microbiome studies. This would enhance comparability and facilitate the integration of findings. Such efforts will also advance our understanding of the microbial diversity associated with wildlife, and its potential implications for their health and conservation 2023-10-27 Conference or Workshop Item PeerReviewed text en http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf Haris, Hidayah and Nur Hartini Sariyati, Nur Hartini Sariyati and Ramli, Farah Farhana and Abdullah-Fauzi, Nurfatiha Akmal Fawwazah and Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani and Md-Zain, Badrul Munir and Mohd-Ridwan, Abd Rahman and Aifat, Nor Rahman and Ibnu Maryanto, Ibnu Maryanto and Abdul-Latiff, Muhammad Abu Bakar (2023) Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies. In: BIO Web of Conferences. https://doi.org/10.1051/bioconf/20249401005
institution	Universiti Tun Hussein Onn Malaysia
building	UTHM Library
collection	Institutional Repository
continent	Asia
country	Malaysia
content_provider	Universiti Tun Hussein Onn Malaysia
content_source	UTHM Institutional Repository
url_provider	http://eprints.uthm.edu.my/
language	English
topic	QH540-549.5 Ecology
spellingShingle	QH540-549.5 Ecology Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
description	Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variability, impeding the comparability of findings. This study addresses this issue by examining methodological variations in gut microbiome research on wildlife and domesticated animals in Southeast Asia. A comprehensive search of 91 relevant studies on the SCOPUS database yielded 54 suitable publications for review, encompassing diverse taxa such as invertebrates (20), fishes (7), reptiles (3), birds (5), and mammals (19). Notably, various methodological approaches were employed to characterize microbial communities, including the source of isolation, various culture-based approaches, sequencing methods, and the targeted markers. Based on the information provided in this study, future studies should strive to develop guidelines and best practices specific to gut microbiome studies. This would enhance comparability and facilitate the integration of findings. Such efforts will also advance our understanding of the microbial diversity associated with wildlife, and its potential implications for their health and conservation
format	Conference or Workshop Item
author	Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar
author_facet	Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar
author_sort	Haris, Hidayah
title	Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
title_short	Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
title_full	Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
title_fullStr	Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
title_full_unstemmed	Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
title_sort	assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
publishDate	2023
url	http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf http://eprints.uthm.edu.my/11698/ https://doi.org/10.1051/bioconf/20249401005
_version_	1816133309157081088
score	13.22586

Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies

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