Cover Image

Identification of oil palm’s consistently upregulated genes during early infections of Ganoderma boninense via RNA-Seq technology and real-time quantitative PCR

Basal stem rot (BSR) disease caused by pathogenic fungus Ganoderma boninense is a significant concern in the oil palm industry. G. boninense infection in oil palm induces defense-related genes. To understand oil palm defense mechanisms in response to fungal invasion, we analyzed differentially expre...

Full description

Saved in:

Bibliographic Details
Main Authors:	Mohd Zuhar, Liyana, Ahmad Zairun, Madihah, Ahmad, Siti Aqlima, Zainal, Zamri, Idris, Abu Seman, Shaharuddin, Noor Azmi
Format:	Article
Language:	English
Published:	Multidisciplinary Digital Publishing Institute 2021
Online Access:	http://psasir.upm.edu.my/id/eprint/97603/1/ABSTRACT.pdf http://psasir.upm.edu.my/id/eprint/97603/ https://www.mdpi.com/2223-7747/10/10/2026
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Transcriptomic analysis of ganoderma-infected oil palms via RNA-seq technology and real-time PCR
by: Mohd Zuhar, Liyana
Published: (2017)

Isolation and selection of reference genes for Ganoderma boninense gene expression study using quantitative real-time PCR (qPCR)
by: Lim, Fook Hwa, et al.
Published: (2014)

RNA-seq data of Ganoderma boninense at axenic culture condition and under in planta pathogen-oil palm (Elaeis guineensis Jacq.) interaction
by: Wong, Mui Yun, et al.
Published: (2019)

RNA-seq data of Ganoderma boninense at axenic culture condition and under in planta pathogen-oil palm (Elaeis guineensis Jacq.) interaction
by: Wong, Mui Yun, et al.
Published: (2019)

Devising a colorimetric aptasensor for detection of basal stem rot-associated RNA marker during early Ganoderma boninense infection in oil palm
by: Bahari, Mohammad Nazri Abdul, et al.
Published: (2023)

Determination of reference genes for normalisation of gene expression study of Ganoderma-infected oil palms
by: Mohd Zuhar, Liyana, et al.
Published: (2019)

RNA-seq analysis in plant–fungus interactions
by: Ling, Ho Chai, et al.
Published: (2017)

Fast processing RNA-Seq on multicore processor
by: Lee, Jia Bin, et al.
Published: (2021)

Evaluation and improvement of protocols for Ganoderma boninense protoplast isolation and regeneration
by: Anis Farhan Fatimi Ab Wahab,, et al.
Published: (2022)

Molecular pcr assays for detection of Ganoderma pathogenic to oil palm in Malaysia
by: Nur Hailini Zainol Hilmi,, et al.
Published: (2022)

RNA-seq and ChIP-seq as complementary approaches for comprehension of plant transcriptional regulatory mechanism
by: Muhammad, Isiaka Ibrahim, et al.
Published: (2020)

Identification of oil palm root-specific genes through mining of RNA-Seq data and RT-qPCR analysis
by: Subhi, Siti Masura, et al.
Published: (2021)

Iso-seq and RNA-seq profiling of Fenneropenaeus penicillatus: Unravelling the signaling pathway and genes involved in the ovarian development
by: Kianann Tan, et al.
Published: (2023)

Transcriptional regulatory mechanism of early defense response of oil palm against Ganoderma boninense
by: Abdul Bahari, Mohammad Nazri, et al.
Published: (2017)

Early detection of Ganoderma boninense in oil palm seedlings using support vector machines
by: Noor Azmi, Aiman Nabilah, et al.
Published: (2020)

RNA-Seq and validation analysis on the important genes involved in early responses to salinity stress of Malaysian rice seedlings (Oryza sativa ssp. Indica)
by: Juri, Nor Mustaiqazah, et al.
Published: (2019)

SEQ2SEQ++: a multitasking-based seq2seq model to generate meaningful and relevant answers
by: Palasundram, Kulothunkan, et al.
Published: (2021)

Optimization of illumina TruSeq Targeted RNA expression (TREx) library quality
by: Abu, Nadiah, et al.
Published: (2018)

Integration of RNA-Seq and proteomics data identifies glioblastoma multiforme surfaceome signature
by: Saiful Effendi Syafruddin, et al.
Published: (2021)

Detection and control of Ganoderma boninense : strategies and perspectives
by: Hushiarian, Roozbeh, et al.
Published: (2013)

Ergosterol from the soilborne fungus Ganoderma boninense.
by: Toh Choon, R.L., et al.
Published: (2011)

Phytochemical investigation and antioxidant activity of ganoderma boninense
by: Yow, San Chan, et al.
Published: (2020)

Evaluation of multiple In Situ and remote sensing system for early detection of Ganoderma boninense infected oil palm
by: Ahmadi, Seyedeh Parisa
Published: (2018)

Terahertz sensing analysis for early detection of ganoderma boninense disease using near infrared (NIR) spectrometer
by: Mas Ira Syafila, Mohd Hilmi Tan
Published: (2023)

A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
by: Sharvin Manickam, et al.
Published: (2022)

Comparison of methods for isolating high quality genomic dna and total rna from the mycelia of an oil palm pathogen, Ganoderma boninense
by: Irene, L.I., et al.
Published: (2015)

In silico genome-wide computational profiling of non-coding RNA in oil palm Elaeis guineensis and its pathogen Ganoderma boninense
by: Farah Nini Othman,, et al.
Published: (2022)

Ganoderma boninense Pat. from oil palm in Malaysia
by: Ho, Yin Wan, et al.
Published: (1986)

Phytol-containing seaweed extracts as control for Ganoderma boninense
by: Abdul Aziz, Syamimi Diyana, et al.
Published: (2019)

The potential of papaya leaf extract in controlling Ganoderma boninense
by: Z H Tay, et al.
Published: (2016)

Ganoderma boninense: general characteristics of pathogenicity and methods of control
by: Ying Wei Khoo, et al.
Published: (2023)

Isolation and Screening of Actinomycetes Antagonistic to Ganoderma boninense Pat.
by: Tuan Noraida, Tuan Hamzah
Published: (2014)

In vitro antifungal activity of thiram against Ganoderma boninense
by: Elleiancly Yuli, et al.
Published: (2020)

Molecular cloning and expression analysis of Ganoderma boninense cyclophilins at different growth and infection stages
by: Lim, Fook Hwa, et al.
Published: (2017)

Basidiospore and protoplast regeneration from raised fruiting bodies of pathogenic Ganoderma boninense
by: Govender, Nisha Thopla, et al.
Published: (2016)

Early detection of Ganoderma boninense infection in oil palm based on expression of fatty acid biosynthesis pathway genes
by: Abdullah, Siti Nor Akmar, et al.
Published: (2011)

Expression of selected pathogenesis-related proteins at early stage of Ganoderma boninense infection in Elaeis guineensis jacq. seedlings
by: Ramli, Redzyque Ramza
Published: (2019)

Early detection of Ganoderma boninense in oil palm seedlings using hyperspectral images and machine learning classification techniques
by: Noor Azmi, Aiman Nabilah
Published: (2021)

A partial length cyclophilin-encoding (cyp) cDNA isolated from Ganoderma boninense
by: Lim, Fook Hwa, et al.
Published: (2011)

Transcriptional profiling of coaggregation interactions between Streptococcus gordonii and Veillonella parvula by Dual RNA-Seq
by: Mutha, Naresh V.R., et al.
Published: (2019)