Staff View: Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh

Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh

Sugarcane (Saccharum officinarum L.) is one of the important cash crops and the main source of white sugar in tropical and sub-tropical regions. Colletotrichum falcatum Went is the causative agent of sugarcane red rot disease worldwide. This pathogen is diverse in pathological and molecular characte...

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Main Authors:	Hossain, Md Imam, Vadamalai, Ganesan, Saad, Norsazilawati, Mohd Hata, Erneeza, Khaiyam, Md Omar, Rahman, Muhammad Ziaur, Kutawa, Abdulaziz Bashir, Mohd Zobir, Syazwan Afif, Ahmad, Khairulmazmi
Format:	Article
Published:	Springer Nature Switzerland 2022
Online Access:	http://psasir.upm.edu.my/id/eprint/100420/ https://link.springer.com/article/10.1007/s40858-022-00531-y
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id	my.upm.eprints.100420
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spelling	my.upm.eprints.1004202023-12-15T23:05:58Z http://psasir.upm.edu.my/id/eprint/100420/ Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh Hossain, Md Imam Vadamalai, Ganesan Saad, Norsazilawati Mohd Hata, Erneeza Khaiyam, Md Omar Rahman, Muhammad Ziaur Kutawa, Abdulaziz Bashir Mohd Zobir, Syazwan Afif Ahmad, Khairulmazmi Sugarcane (Saccharum officinarum L.) is one of the important cash crops and the main source of white sugar in tropical and sub-tropical regions. Colletotrichum falcatum Went is the causative agent of sugarcane red rot disease worldwide. This pathogen is diverse in pathological and molecular characteristics. This study is aimed to assess the vırulence patterns and role of pathogenıcity-related genes of C. falcatum Went. A total of 41 isolates were isolated from four sugarcane major growing regions of Bangladesh from 2018 to 2019 cropping seasons. The virulence test field experiment was conducted at Bangladesh Sugarcrop Research Institute (BSRI) research farm in randomized completely block design (RCBD) with three replications from January to December in 2019 and 2020. The pathogenicity-related gene molecular experiments were carried out at the Bacteriology Laboratory, University Putra Malaysia (UPM). The assessment of disease parameters was based on the published procedures. Out of 41 isolates, three isolates were virulent,18 isolates were moderately virulent and 13 isolates were the least virulent. The rest of the seven isolates had demonstrated different virulence attributes in the assessment periods. All C. falcatum isolates possessed PKS1, HXT1, and Pel2 genes and had a high similarity value but showed variation among the virulent, moderately virulent, and the least virulent isolates. Nucleotide substitutions and deletions in some loci are the possible causes of variation among them.These findings would help in understanding the variability of C. falcatum isolates based on sugarcane differential hosts, and the role of pathogenicity-related genes during pathogenesis. Springer Nature Switzerland 2022-09-26 Article PeerReviewed Hossain, Md Imam and Vadamalai, Ganesan and Saad, Norsazilawati and Mohd Hata, Erneeza and Khaiyam, Md Omar and Rahman, Muhammad Ziaur and Kutawa, Abdulaziz Bashir and Mohd Zobir, Syazwan Afif and Ahmad, Khairulmazmi (2022) Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh. Tropical Plant Pathology, 47. pp. 737-753. ISSN 1983-2052 https://link.springer.com/article/10.1007/s40858-022-00531-y 10.1007/s40858-022-00531-y
institution	Universiti Putra Malaysia
building	UPM Library
collection	Institutional Repository
continent	Asia
country	Malaysia
content_provider	Universiti Putra Malaysia
content_source	UPM Institutional Repository
url_provider	http://psasir.upm.edu.my/
description	Sugarcane (Saccharum officinarum L.) is one of the important cash crops and the main source of white sugar in tropical and sub-tropical regions. Colletotrichum falcatum Went is the causative agent of sugarcane red rot disease worldwide. This pathogen is diverse in pathological and molecular characteristics. This study is aimed to assess the vırulence patterns and role of pathogenıcity-related genes of C. falcatum Went. A total of 41 isolates were isolated from four sugarcane major growing regions of Bangladesh from 2018 to 2019 cropping seasons. The virulence test field experiment was conducted at Bangladesh Sugarcrop Research Institute (BSRI) research farm in randomized completely block design (RCBD) with three replications from January to December in 2019 and 2020. The pathogenicity-related gene molecular experiments were carried out at the Bacteriology Laboratory, University Putra Malaysia (UPM). The assessment of disease parameters was based on the published procedures. Out of 41 isolates, three isolates were virulent,18 isolates were moderately virulent and 13 isolates were the least virulent. The rest of the seven isolates had demonstrated different virulence attributes in the assessment periods. All C. falcatum isolates possessed PKS1, HXT1, and Pel2 genes and had a high similarity value but showed variation among the virulent, moderately virulent, and the least virulent isolates. Nucleotide substitutions and deletions in some loci are the possible causes of variation among them.These findings would help in understanding the variability of C. falcatum isolates based on sugarcane differential hosts, and the role of pathogenicity-related genes during pathogenesis.
format	Article
author	Hossain, Md Imam Vadamalai, Ganesan Saad, Norsazilawati Mohd Hata, Erneeza Khaiyam, Md Omar Rahman, Muhammad Ziaur Kutawa, Abdulaziz Bashir Mohd Zobir, Syazwan Afif Ahmad, Khairulmazmi
spellingShingle	Hossain, Md Imam Vadamalai, Ganesan Saad, Norsazilawati Mohd Hata, Erneeza Khaiyam, Md Omar Rahman, Muhammad Ziaur Kutawa, Abdulaziz Bashir Mohd Zobir, Syazwan Afif Ahmad, Khairulmazmi Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
author_facet	Hossain, Md Imam Vadamalai, Ganesan Saad, Norsazilawati Mohd Hata, Erneeza Khaiyam, Md Omar Rahman, Muhammad Ziaur Kutawa, Abdulaziz Bashir Mohd Zobir, Syazwan Afif Ahmad, Khairulmazmi
author_sort	Hossain, Md Imam
title	Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
title_short	Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
title_full	Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
title_fullStr	Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
title_full_unstemmed	Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh
title_sort	assessment of vırulence patterns and pathogenıcıty-related genes of colletotrichum falcatum went in bangladesh
publisher	Springer Nature Switzerland
publishDate	2022
url	http://psasir.upm.edu.my/id/eprint/100420/ https://link.springer.com/article/10.1007/s40858-022-00531-y
_version_	1787137204306313216
score	13.211869

Assessment of vırulence patterns and pathogenıcıty-related genes of Colletotrichum falcatum Went in Bangladesh

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