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Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.

There are about 1,240 species of Chiroptera that have been divided into two suborders: the less specialized and largely fruit-eating megabats, or flying foxes, and the highly specialized and echolocating microbats. DNA sequences of 23 species subfamily Vespertilioninae of Chiroptera that used mitoch...

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Main Author: Muhammad Afifi Rahim
Format: Undergraduate Final Project Report
Language:English
Published: 2017
Online Access:http://discol.umk.edu.my/id/eprint/7204/1/MUHAMMAD%20AFIFI.pdf
http://discol.umk.edu.my/id/eprint/7204/
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spelling my.umk.eprints.72042024-07-15T08:29:27Z http://discol.umk.edu.my/id/eprint/7204/ Phylogenetic analysis on family chiroptera using cytochrome B gene sequences. Muhammad Afifi Rahim There are about 1,240 species of Chiroptera that have been divided into two suborders: the less specialized and largely fruit-eating megabats, or flying foxes, and the highly specialized and echolocating microbats. DNA sequences of 23 species subfamily Vespertilioninae of Chiroptera that used mitochondrial cytochrome b gene to evaluate phylogenetic relationships between genera was obtained from GenBank NCBI database and were successfully aligned. The analysis of phylogeny to obtain the confidency value of each model and to compare the differences between phylogenetic methods in estimating ancestry of samples of each model involved the method of Neighbor-Joining, Minimum Evolution, Maximum Parsimony, Maximum Likelihood and Bayesian Inference. All 63 partial cytochrome b sequence fragments with at least 1,000 bp linear DNA were run through five different methods of phylogeny analysis methods. Phylogeny tree were successfully constructed for each model and were summarised accordingly with its bootstrap value. 2017 Undergraduate Final Project Report NonPeerReviewed text en http://discol.umk.edu.my/id/eprint/7204/1/MUHAMMAD%20AFIFI.pdf Muhammad Afifi Rahim (2017) Phylogenetic analysis on family chiroptera using cytochrome B gene sequences. Final Year Project thesis, Universiti Malaysia Kelantan. (Submitted)
institution Universiti Malaysia Kelantan
building Perpustakaan Universiti Malaysia Kelantan
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Kelantan
content_source UMK Institutional Repository
url_provider http://umkeprints.umk.edu.my/
language English
description There are about 1,240 species of Chiroptera that have been divided into two suborders: the less specialized and largely fruit-eating megabats, or flying foxes, and the highly specialized and echolocating microbats. DNA sequences of 23 species subfamily Vespertilioninae of Chiroptera that used mitochondrial cytochrome b gene to evaluate phylogenetic relationships between genera was obtained from GenBank NCBI database and were successfully aligned. The analysis of phylogeny to obtain the confidency value of each model and to compare the differences between phylogenetic methods in estimating ancestry of samples of each model involved the method of Neighbor-Joining, Minimum Evolution, Maximum Parsimony, Maximum Likelihood and Bayesian Inference. All 63 partial cytochrome b sequence fragments with at least 1,000 bp linear DNA were run through five different methods of phylogeny analysis methods. Phylogeny tree were successfully constructed for each model and were summarised accordingly with its bootstrap value.
format Undergraduate Final Project Report
author Muhammad Afifi Rahim
spellingShingle Muhammad Afifi Rahim
Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
author_facet Muhammad Afifi Rahim
author_sort Muhammad Afifi Rahim
title Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
title_short Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
title_full Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
title_fullStr Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
title_full_unstemmed Phylogenetic analysis on family chiroptera using cytochrome B gene sequences.
title_sort phylogenetic analysis on family chiroptera using cytochrome b gene sequences.
publishDate 2017
url http://discol.umk.edu.my/id/eprint/7204/1/MUHAMMAD%20AFIFI.pdf
http://discol.umk.edu.my/id/eprint/7204/
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score 13.211869

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