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Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia

A study on the phylogeneticso f Mocroglossuss obrinus( GreaterL ong-nosedF ruit Bat)from Peninsular Malaysia was done using partial cytochrome b (cyt-b) mitochondrial DNA (mtDNA)g ene.T he specimenso f M. sobrinusw ere collectedf rom Kedah( WengU lu Muda ForestR eserve)P, erak( BintangF orestR eser...

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Main Authors: Fauzan Ahmad, Hajar, Japning, Jeffrine Rovie Ryon, Senawi, Juliana, Kamarudin, Kamarul Rahim
Format: Book Chapter
Language:English
Published: Department of Wildlife and National Parks Peninsular Malaysia 2008
Subjects:
QL Zoology
Online Access:http://irep.iium.edu.my/12716/1/2008_PERHILITAN_Book_Fauzan_Kamarul_M.sobrinus.pdf
http://irep.iium.edu.my/12716/
http://www.wildlife.gov.my/
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spelling my.iium.irep.127162014-01-11T22:17:33Z http://irep.iium.edu.my/12716/ Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia Fauzan Ahmad, Hajar Japning, Jeffrine Rovie Ryon Senawi, Juliana Kamarudin, Kamarul Rahim QL Zoology A study on the phylogeneticso f Mocroglossuss obrinus( GreaterL ong-nosedF ruit Bat)from Peninsular Malaysia was done using partial cytochrome b (cyt-b) mitochondrial DNA (mtDNA)g ene.T he specimenso f M. sobrinusw ere collectedf rom Kedah( WengU lu Muda ForestR eserve)P, erak( BintangF orestR eserve)s, elangor( Ulu Langat),M elaka (Asahan Catchment Area), Johor (Gunung Ledang), Kelantan (Gua Musang), and pahang (Krau WildlifeR eserve)T. hirty ninec yt-bs equencesin cludinge ighteens equenceso f M. sobrinus, twenty sequenceso f M. minimust aken from the GenBanka, nd a sequenceo f Penthetor /ucosi( Lucas'sS hort-nosedF ruit Bat) as an outgroup were incorporatedi n the analyses. Three main methods namely neighbourj oining (NJ) ,m aximum parsimony( Mp) , and maximuml ikelihood( ML) were usedi n the phylogenetictr ees reconstructionfo llowed by the consensusp hylogenetictr ee to summarizet he overallf indings.T he four trees were reconstructedto determinet he geneticr elationshipb etweenM . sobrinusa ndM . minimus. Generallyt,h e trees indicatedg eneticd ivergenceb etweenp opulationso f M. sobrinus.The resultw as fur,thers upportedb y very low geneticd istancesb asedo n Kimura2 -parameter distance( 1980)c alculationT. herew as an individuaol f M. sobrinus( GuaM usang,K elantan) 55 clusteredw ith the M. minimus individualst,h us indicatingo f possiblem isidentification. Apart from that, M. sobrinusf rom Kelantang avet he highestn ucleotided iversity,P 1(J ukes & Cantor1 969)w ith 0,65%,f ollowed by Perak( 0.36%),K edah( 0.27%)S, elangor( 0.78%1, and finally Pahang and Melaka with no nucleotide diversity. Overall, the nucleotide diversityo f M. sobrinusi n PeninsularM alaysiaw as 0.29%i ndicatingl ow level of genetic diversity. However, the sample size is too small to relate the results with the phylogeography and population genetic views. Therefore, more extensive studies incorporatingo ther mtDNAg enesw ith higherr ate of evolutions ucha s control regiong ene are highlyr ecommendedin the futures tudV Department of Wildlife and National Parks Peninsular Malaysia 2008 Book Chapter REM application/pdf en http://irep.iium.edu.my/12716/1/2008_PERHILITAN_Book_Fauzan_Kamarul_M.sobrinus.pdf Fauzan Ahmad, Hajar and Japning, Jeffrine Rovie Ryon and Senawi, Juliana and Kamarudin, Kamarul Rahim (2008) Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia. In: Biodiversity Resources and Conservation Status in Peninsular Malaysia. Department of Wildlife and National Parks Peninsular Malaysia, Kuala Lumpur, pp. 55-65. ISBN 978-983-44181-3-7 http://www.wildlife.gov.my/
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
topic QL Zoology
spellingShingle QL Zoology
Fauzan Ahmad, Hajar
Japning, Jeffrine Rovie Ryon
Senawi, Juliana
Kamarudin, Kamarul Rahim
Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
description A study on the phylogeneticso f Mocroglossuss obrinus( GreaterL ong-nosedF ruit Bat)from Peninsular Malaysia was done using partial cytochrome b (cyt-b) mitochondrial DNA (mtDNA)g ene.T he specimenso f M. sobrinusw ere collectedf rom Kedah( WengU lu Muda ForestR eserve)P, erak( BintangF orestR eserve)s, elangor( Ulu Langat),M elaka (Asahan Catchment Area), Johor (Gunung Ledang), Kelantan (Gua Musang), and pahang (Krau WildlifeR eserve)T. hirty ninec yt-bs equencesin cludinge ighteens equenceso f M. sobrinus, twenty sequenceso f M. minimust aken from the GenBanka, nd a sequenceo f Penthetor /ucosi( Lucas'sS hort-nosedF ruit Bat) as an outgroup were incorporatedi n the analyses. Three main methods namely neighbourj oining (NJ) ,m aximum parsimony( Mp) , and maximuml ikelihood( ML) were usedi n the phylogenetictr ees reconstructionfo llowed by the consensusp hylogenetictr ee to summarizet he overallf indings.T he four trees were reconstructedto determinet he geneticr elationshipb etweenM . sobrinusa ndM . minimus. Generallyt,h e trees indicatedg eneticd ivergenceb etweenp opulationso f M. sobrinus.The resultw as fur,thers upportedb y very low geneticd istancesb asedo n Kimura2 -parameter distance( 1980)c alculationT. herew as an individuaol f M. sobrinus( GuaM usang,K elantan) 55 clusteredw ith the M. minimus individualst,h us indicatingo f possiblem isidentification. Apart from that, M. sobrinusf rom Kelantang avet he highestn ucleotided iversity,P 1(J ukes & Cantor1 969)w ith 0,65%,f ollowed by Perak( 0.36%),K edah( 0.27%)S, elangor( 0.78%1, and finally Pahang and Melaka with no nucleotide diversity. Overall, the nucleotide diversityo f M. sobrinusi n PeninsularM alaysiaw as 0.29%i ndicatingl ow level of genetic diversity. However, the sample size is too small to relate the results with the phylogeography and population genetic views. Therefore, more extensive studies incorporatingo ther mtDNAg enesw ith higherr ate of evolutions ucha s control regiong ene are highlyr ecommendedin the futures tudV
format Book Chapter
author Fauzan Ahmad, Hajar
Japning, Jeffrine Rovie Ryon
Senawi, Juliana
Kamarudin, Kamarul Rahim
author_facet Fauzan Ahmad, Hajar
Japning, Jeffrine Rovie Ryon
Senawi, Juliana
Kamarudin, Kamarul Rahim
author_sort Fauzan Ahmad, Hajar
title Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
title_short Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
title_full Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
title_fullStr Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
title_full_unstemmed Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
title_sort phylogenetic analysis of macroglossus sobrinus from peninsular malaysia
publisher Department of Wildlife and National Parks Peninsular Malaysia
publishDate 2008
url http://irep.iium.edu.my/12716/1/2008_PERHILITAN_Book_Fauzan_Kamarul_M.sobrinus.pdf
http://irep.iium.edu.my/12716/
http://www.wildlife.gov.my/
_version_ 1643606653098000384
score 13.211869

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