Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment
Background :The condition of blood vessel network in the retina is an essential part of diagnosing various problems associ-ated with eyes, such as diabetic retinopathy. Methods :In this study, an automatic retinal vessel segmentation utilising fuzzy c-means clustering and level sets is proposed. Ret...
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| Format: | Article |
| Language: | en |
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Springer
2019
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| Online Access: | http://psasir.upm.edu.my/id/eprint/82012/1/Retinal%20blood%20vessel%20.pdf http://psasir.upm.edu.my/id/eprint/82012/ https://link.springer.com/article/10.1007/s40846-018-0454-2 |
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| author | Memari, Nogol Ramli, Abd Rahman Saripan, M. Iqbal Mashohor, Syamsiah Moghbel, Mehrdad |
| author_facet | Memari, Nogol Ramli, Abd Rahman Saripan, M. Iqbal Mashohor, Syamsiah Moghbel, Mehrdad |
| author_sort | Memari, Nogol |
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| content_provider | Universiti Putra Malaysia |
| content_source | UPM Institutional Repository |
| continent | Asia |
| country | Malaysia |
| description | Background :The condition of blood vessel network in the retina is an essential part of diagnosing various problems associ-ated with eyes, such as diabetic retinopathy. Methods :In this study, an automatic retinal vessel segmentation utilising fuzzy c-means clustering and level sets is proposed. Retinal images are contrast-enhanced utilising contrast limited adaptive histogram equalisation while the noise is reduced by using mathematical morphology followed by matched filtering steps that use Gabor and Frangi filters to enhance the blood vessel network prior to clustering. A genetic algorithm enhanced spatial fuzzy c-means method is then utilised for extracting an initial blood vessel network, with the segmentation further refined by using an integrated level set approach.Results:The proposed method is validated by using publicly accessible digital retinal images for vessel extraction, structured analysis of the retina and Child Heart and Health Study in England (CHASE_DB1) datasets. These datasets are commonly used for benchmarking the accuracy of retinal vessel segmentation methods where it was shown to achieve a mean accuracy of 0.961, 0.951 and 0.939, respectively.Conclusion: The proposed segmentation method was able to achieve comparable accuracy to other methods while being very close to the manual segmentation provided by the second observer in all datasets. |
| format | Article |
| id | my.upm.eprints-82012 |
| institution | Universiti Putra Malaysia |
| language | en |
| publishDate | 2019 |
| publisher | Springer |
| record_format | eprints |
| spelling | my.upm.eprints-820122021-09-08T21:53:02Z http://psasir.upm.edu.my/id/eprint/82012/ Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment Memari, Nogol Ramli, Abd Rahman Saripan, M. Iqbal Mashohor, Syamsiah Moghbel, Mehrdad Background :The condition of blood vessel network in the retina is an essential part of diagnosing various problems associ-ated with eyes, such as diabetic retinopathy. Methods :In this study, an automatic retinal vessel segmentation utilising fuzzy c-means clustering and level sets is proposed. Retinal images are contrast-enhanced utilising contrast limited adaptive histogram equalisation while the noise is reduced by using mathematical morphology followed by matched filtering steps that use Gabor and Frangi filters to enhance the blood vessel network prior to clustering. A genetic algorithm enhanced spatial fuzzy c-means method is then utilised for extracting an initial blood vessel network, with the segmentation further refined by using an integrated level set approach.Results:The proposed method is validated by using publicly accessible digital retinal images for vessel extraction, structured analysis of the retina and Child Heart and Health Study in England (CHASE_DB1) datasets. These datasets are commonly used for benchmarking the accuracy of retinal vessel segmentation methods where it was shown to achieve a mean accuracy of 0.961, 0.951 and 0.939, respectively.Conclusion: The proposed segmentation method was able to achieve comparable accuracy to other methods while being very close to the manual segmentation provided by the second observer in all datasets. Springer 2019 Article PeerReviewed text en http://psasir.upm.edu.my/id/eprint/82012/1/Retinal%20blood%20vessel%20.pdf Memari, Nogol and Ramli, Abd Rahman and Saripan, M. Iqbal and Mashohor, Syamsiah and Moghbel, Mehrdad (2019) Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment. Journal of Medical and Biological Engineering, 39. pp. 713-731. ISSN 1609-0985; ESSN: 2199-4757 https://link.springer.com/article/10.1007/s40846-018-0454-2 10.1007/s40846-018-0454-2 |
| spellingShingle | Memari, Nogol Ramli, Abd Rahman Saripan, M. Iqbal Mashohor, Syamsiah Moghbel, Mehrdad Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title | Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title_full | Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title_fullStr | Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title_full_unstemmed | Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title_short | Retinal blood vessel segmentation by using matched filtering and fuzzy C-means clustering with integrated level set method for diabetic retinopathy assessment |
| title_sort | retinal blood vessel segmentation by using matched filtering and fuzzy c-means clustering with integrated level set method for diabetic retinopathy assessment |
| url | http://psasir.upm.edu.my/id/eprint/82012/1/Retinal%20blood%20vessel%20.pdf http://psasir.upm.edu.my/id/eprint/82012/ https://link.springer.com/article/10.1007/s40846-018-0454-2 |
| url_provider | http://psasir.upm.edu.my/ |