Molecular Phylogenetics and Phylogeography of Malaysian Mousedeer (Tragulus kanchil) Based on Mitochondrial DNA Sequences of the D-Loop Region = (Filogenetik Molekul dan Filogeografi Pelanduk Malaysia (Tragulus kanchil) Berdasarkan Jujukan DNA Mitokondria Kawasan D-Loop)
Two sympatric mousedeer species, Tragulus kanchil and Tragulus napu, inhabit the Malaysian tropical rainforests. Previous studies have established their phylogenetic relationships based on morphological variations; however, comprehensive genetic data have yet to be extensively used to relate the r...
Saved in:
| Main Authors: | , , , , , , |
|---|---|
| Format: | Article |
| Language: | en |
| Published: |
Penerbit UKM (UKM Press)
2024
|
| Subjects: | |
| Online Access: | http://ir.unimas.my/id/eprint/45357/1/Molecular%20Phylogenetics.pdf http://ir.unimas.my/id/eprint/45357/ http://www.ukm.edu.my/jsm/malay_journals/jilid53bil7_2024/Jilid53Bil7_2024ms%203.html http://doi.org/10.17576/jsm-2024-5307-03 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| Summary: | Two sympatric mousedeer species, Tragulus kanchil and Tragulus napu, inhabit the Malaysian tropical rainforests.
Previous studies have established their phylogenetic relationships based on morphological variations; however,
comprehensive genetic data have yet to be extensively used to relate the relationships especially from different
populations. The main objectives of this study were to determine the phylogenetic relationships, population genetics,
and phylogeography of mousedeer species based on DNA sequences of the mitochondrial D-loop region. DNA from
32 mousedeer samples, representing various populations in Malaysia, was sequenced and analyzed using NeighborJoining, Maximum Parsimony, and Bayesian Inference approaches. The phylogenetic analyses showed two main
clades representing the populations of T. kanchil and T. napu. The results also showed that the T. kanchil populations
in Borneo was separated from Peninsular Malaysia taxa in MP and BI phylogenetic tree. However, Borneo population
was nested in east population of Peninsular Malaysia in NJ tree. In addition, the T. kanchil population in Peninsular
Malaysia further separated into east and west coast populations of Titiwangsa Range. It was supported with finding
in population genetic relation that showed relatively low levels among population. This is expected because some
of the populations are isolated geographically. The divergence of these populations is likely due to the Titiwangsa
Range which acts as a barrier separating the east and west Peninsular Malaysia populations, and the South China Sea
separates the populations of Peninsular Malaysia and Borneo. Molecular clock tree reconstruction showed that the
separation of T. kanchil and T. napu occurred around 17.11 million years ago (MYAs). Furthermore, the T. kanchil
populations from the east and west Peninsular Malaysia showed a branching pattern from those of Borneo of about
11.04 and 9.14 MYAs, respectively. The results of this study increase our understanding of Malaysian mousedeer
phylogeny and phylogeography. |
|---|