Process optimisation for anion exchange monolithic chromatography of 4.2 kbp plasmid vaccine (pcDNA3F)

Anion exchange monolithic chromatography is increasingly becoming a prominent tool for plasmid DNA purification but no generic protocol is available to purify all types of plasmid DNA. In this work, we established a simple framework and used it to specifically purify a plasmid DNA model from a clari...

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Bibliographic Details
Main Authors: Clarence M. Ongkudon, Michael K Danquah
Format: Article
Language:en
en
Published: Elsevier 2010
Subjects:
Online Access:https://eprints.ums.edu.my/id/eprint/21552/1/Process%20optimisation%20for%20anion%20exchange%20monolithic%20chromatography%20of%204.pdf
https://eprints.ums.edu.my/id/eprint/21552/7/Process%20optimisation%20for%20anion%20exchange%20monolithic%20chromatography%20of%204.2%20kbp%20plasmid%20vaccine%20%28pcDNA3F%29.pdf
https://eprints.ums.edu.my/id/eprint/21552/
https://www.doi.org/10.1016/j.jchromb.2010.08.011
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Summary:Anion exchange monolithic chromatography is increasingly becoming a prominent tool for plasmid DNA purification but no generic protocol is available to purify all types of plasmid DNA. In this work, we established a simple framework and used it to specifically purify a plasmid DNA model from a clarified alkaline-lysed plasmid-containing cell lysate. The framework involved optimising ligand functionalisation temperature (30–80 ◦C), mobile phase flow rate (0.1–1.8 mL/min), monolith pore size (done by changing the porogen content in the polymerisation reaction by 50–80%), buffer pH (6–10), ionic strength of binding buffer (0.3–0.7 M) and buffer gradient elution slope (1–10% buffer B/min). We concluded that preferential pcDNA3F adsorption and optimum resolution could be achieved within the tested conditions by loading the clarified cell lysate into 400 nm pore size of monolith in 0.7 M NaCl (pH 6) of binding buffer followed by increasing the NaCl concentration to 1.0 M at 3%B/min