Web Application for Genetic Modification Flux with Database to Estimate Metabolic Fluxes of Genetic Mutants

Computational analysis of metabolic fluxes is essential in understanding the structure and function of a metabolic network and in rationally designing genetically modified mutants for an engineering purpose. We had presented the genetic modification flux (GMF) that predicts the flux distribution of...

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Bibliographic Details
Main Authors: Noorlin, Mohd Ali, Tsuboi, Ryo, Matsumoto, Yuta, Koishi, Daisuke, Inoue, Kentaro, Maeda, Kazuhiro, Kurata, Hiroyuki
Format: Article
Language:en
Published: Elsevier 2016
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Online Access:http://umpir.ump.edu.my/id/eprint/12892/8/Web%20application%20for%20Genetic%20Modification%20Flux%20with%20database%20to%20estimate%20metabolic%20fluxes%20of%20genetic%20mutants.pdf
http://umpir.ump.edu.my/id/eprint/12892/
http://dx.doi.org/10.1016/j.jbiosc.2015.12.001
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Summary:Computational analysis of metabolic fluxes is essential in understanding the structure and function of a metabolic network and in rationally designing genetically modified mutants for an engineering purpose. We had presented the genetic modification flux (GMF) that predicts the flux distribution of a broad range of genetically modified mutants. To enhance the feasibility and usability of GMF, we have developed a web application with a metabolic network database to predict a flux distribution of genetically modified mutants. One hundred and twelve data sets of Escherichia coli, Corynebacterium glutamicum, Saccharomyces cerevisiae, and Chinese hamster ovary were registered as standard models.