Association of HLA locus variant in Parkinson's disease

A variant (rs3129882) in the genome-wide association study (GWAS)-linked variant [in the human leukocyte antigen (HLA) gene region] has been reported to associate with an increased risk of Parkinson's disease (PD) in Caucasian population. Studies among Chinese are limited. To address this, we a...

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Main Authors: Zhao, Y., Gopalai, A.A., Ahmad-Annuar, A., Teng, E.W.L., Prakash, K.M., Tan, L.C.S., Au, W.L., Li, H.H., Lim, Shen Yang, Lim, Soo Kun, Chong, Yip Boon, Tan, Li Ping, Ibrahim, N.M., Tan, E.K.
Format: Article
Published: Wiley 2012
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Online Access:http://eprints.um.edu.my/23071/
https://doi.org/10.1111/cge.12024
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Summary:A variant (rs3129882) in the genome-wide association study (GWAS)-linked variant [in the human leukocyte antigen (HLA) gene region] has been reported to associate with an increased risk of Parkinson's disease (PD) in Caucasian population. Studies among Chinese are limited. To address this, we analysed rs3129882 in a total of 1312 subjects of Chinese ethnicity from independent Asian centers comprising of 675 controls and 637 PD cases. The rs3129882 variant was associated with a decreased risk in our ethnic Chinese PD patients. Logistic regression analysis taking into consideration variables of age, gender and race showed that allele A reduced the risk of PD via a dominant model [odds ratio (OR)=0.77, 95% confidence interval (CI)=0.62, 0.96, p=0.018]. As HLA is a highly polymorphic region, it is possible that ethnic-specific effect or environmental agents may modulate the effect of this GWAS-linked locus in influencing the risk of PD. © 2012 John Wiley & Sons A/S.