The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken
The Bian chicken (Gallus gallus, Linaeus, 1758) is an indigenous breed known for its unique traits that make it well-suited for rearing in the cold regions and highland hills of northern China. To better understand the genetic characteristics of this breed, we conducted high throughput sequencing to...
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Penerbit Universiti Kebangsaan Malaysia
2024
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| Online Access: | http://journalarticle.ukm.my/24943/1/SD%204.pdf http://journalarticle.ukm.my/24943/ https://www.ukm.my/jsm/english_journals/vol53num12_2024/contentsVol53num12_2024.html |
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| _version_ | 1834435070519148544 |
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| author | Bai, Hai Liu, Limin Zhang, Yongfang Wen, Yuping Zhang, Xing Xiang, Hai |
| author_facet | Bai, Hai Liu, Limin Zhang, Yongfang Wen, Yuping Zhang, Xing Xiang, Hai |
| author_sort | Bai, Hai |
| building | Tun Sri Lanang Library |
| collection | Institutional Repository |
| content_provider | Universiti Kebangsaan Malaysia |
| content_source | UKM Journal Article Repository |
| continent | Asia |
| country | Malaysia |
| description | The Bian chicken (Gallus gallus, Linaeus, 1758) is an indigenous breed known for its unique traits that make it well-suited for rearing in the cold regions and highland hills of northern China. To better understand the genetic characteristics of this breed, we conducted high throughput sequencing to determine the complete mitochondrial genome (mitogenome) of the Bian chicken. The mitogenome of the Bian chicken was found to be 16,787 bp in size and consisted of 22 transfer RNA genes, 2 ribosomal RNA genes, 13 protein-coding genes, and 1 non-coding control region known as the D-loop. The overall nucleotide composition was found to be 32.45% C, 30.25% A, 23.8% T, and 13.5% G. Phylogenetic analysis showed that the Bian chicken is distantly related to the Zhuanghe big-boned chicken, but closely related to the Xiaoxiang chicken and Taoyuan chicken. This study not only provides valuable genetic data for the diversity and preservation of the Bian chicken breed, but also contributes additional evidence supporting the significantly different genetic relationship between the Bian chicken and the Zhuanghe big-boned chicken. |
| format | Article |
| id | my-ukm.journal.24943 |
| institution | Universiti Kebangsaan Malaysia |
| language | en |
| publishDate | 2024 |
| publisher | Penerbit Universiti Kebangsaan Malaysia |
| record_format | eprints |
| spelling | my-ukm.journal.249432025-03-17T02:34:30Z http://journalarticle.ukm.my/24943/ The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken Bai, Hai Liu, Limin Zhang, Yongfang Wen, Yuping Zhang, Xing Xiang, Hai The Bian chicken (Gallus gallus, Linaeus, 1758) is an indigenous breed known for its unique traits that make it well-suited for rearing in the cold regions and highland hills of northern China. To better understand the genetic characteristics of this breed, we conducted high throughput sequencing to determine the complete mitochondrial genome (mitogenome) of the Bian chicken. The mitogenome of the Bian chicken was found to be 16,787 bp in size and consisted of 22 transfer RNA genes, 2 ribosomal RNA genes, 13 protein-coding genes, and 1 non-coding control region known as the D-loop. The overall nucleotide composition was found to be 32.45% C, 30.25% A, 23.8% T, and 13.5% G. Phylogenetic analysis showed that the Bian chicken is distantly related to the Zhuanghe big-boned chicken, but closely related to the Xiaoxiang chicken and Taoyuan chicken. This study not only provides valuable genetic data for the diversity and preservation of the Bian chicken breed, but also contributes additional evidence supporting the significantly different genetic relationship between the Bian chicken and the Zhuanghe big-boned chicken. Penerbit Universiti Kebangsaan Malaysia 2024 Article PeerReviewed application/pdf en http://journalarticle.ukm.my/24943/1/SD%204.pdf Bai, Hai and Liu, Limin and Zhang, Yongfang and Wen, Yuping and Zhang, Xing and Xiang, Hai (2024) The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken. Sains Malaysiana, 53 (12). pp. 3883-3894. ISSN 0126-6039 https://www.ukm.my/jsm/english_journals/vol53num12_2024/contentsVol53num12_2024.html |
| spellingShingle | Bai, Hai Liu, Limin Zhang, Yongfang Wen, Yuping Zhang, Xing Xiang, Hai The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title | The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title_full | The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title_fullStr | The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title_full_unstemmed | The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title_short | The characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| title_sort | characterization and maternal phylogenetic analysis of complete mitochondrial genome of the native bian chicken |
| url | http://journalarticle.ukm.my/24943/1/SD%204.pdf http://journalarticle.ukm.my/24943/ https://www.ukm.my/jsm/english_journals/vol53num12_2024/contentsVol53num12_2024.html |
| url_provider | http://journalarticle.ukm.my/ |